- This website collects several computational tools that we developed for CRISPR identification in metagenomic sequences; and some results from the papers we published.
- Contigs and their annotations from Ref 2 (get the data; please read the readme file in the package).
- Ref 1: Mina Rho, Yu-Wei Wu, Haixu Tang, Thomas G. Doak and Yuzhen Ye. Diverse CRISPRs evolving in human microbiomes (PLoS Genetics 8(6): e1002441, 2012).
- Ref 2: Yuzhen Ye and Quan Zhang. Characterization of CRISPR RNA transcription by exploiting stranded metatranscriptomic data. RNA, 22(7):945-56, 2016
- Contact: Yuzhen Ye (email@example.com)