FragGeneScan

• FragGeneScan is an application for finding (fragmented) genes in short reads. FragGeneScan now lives in SourceForge.
• Reference: Mina Rho, Haixu Tang, and Yuzhen Ye. FragGeneScan: Predicting Genes in Short and Error-prone Reads. Nucl. Acids Res., 2010 doi: 10.1093/nar/gkq747 (paper link)
• Download the latest version from SourceForge
  
• Install FragGeneScan using anaconda:
  conda install -c bioconda fraggenescan
• Q & A
• Prediction results (reported in the paper)
• Contact: Yuzhen Ye (yye@indiana.edu)