How to read the MinPath report file? ... path 00030 kegg n/a naive 1 minpath 1 fam0 42 fam-found 18 name Pentose phosphate pathway path 00031 kegg n/a naive 1 minpath 0 fam0 12 fam-found 2 name Inositol metabolism ... 1) path 00030, path 00031 are the KEGG pathway IDs (if your input file has fig families, the pathways will then be SEED subsystems) 2) kegg n/a, indicates pathway reconstruction of your input dataset if not available (note: this information is only available for the genomes annotated in KEGG database); for input with fig families, kegg is replace by seed 3) naive 1 or 0: the pathway is reconstructed, or not, by the naive mapping approach 4) minpath 1 or 0: the pathway is kept, or removed by MinPath 5) fam0: the total number of families involved in the corresponding pathway 6) fam-found: the total number of involved families that are annotated 7) name: the description of the corresponding pathway (subsystem)