DGRscan: a tool for prediction of diversity-generating retroelements (DGR)

• Download DGRscan from GitHub
• DGR systems identified from human microbiome project (HMP) datasets
• Reverse transcriptases: all identified from HMP (765 genes); 90% nonredundant set of the genes identified from HMP (271 genes); 90% nonredundant set of the genes identified from HMP, the reference genomes and the human virome (367 genes)
• Target genes: all identified from HMP (1392 genes); 90% nonredundant set (651 genes)
• Citation: Yuzhen Ye (2014), Identification of Diversity-Generating Retroelements in Human Microbiomes. Int. J. Mol. Sci. 15(8), 14234-14246; doi:10.3390/ijms150814234 (paper)

Last modified on Aug 15, 2014