Template:  C3372742 strand: - 3368-3476 ref: 3365-3477
Variable:  C3372742 strand: - 3913-4021 alnlen 108 mutations 18 involve-A 18 involve-T 0

3476       GGGTGTCTTGTTCGGCGGTAATGCGAATAACAGCGCGAATGCCGGGCTTTCGTACGCGAATACGAATAACACGGCTACGAATACGAATGCGAATATCGGCTCTCAGCT (revcomp)
           ::::::::::::::::::: ::::: ::  : :::::  ::::::::::::::::::: :::::: : :: ::::::::  ::::: ::::  : ::::::::: :::
4021       GGGTGTCTTGTTCGGCGGTTATGCGTATTCCGGCGCGTCTGCCGGGCTTTCGTACGCGTATACGATTTACTCGGCTACGTCTACGACTGCGGCTTTCGGCTCTCGGCT (revcomp)
Template:  C3372742 strand: - 3368-3437 ref: 3365-3477
Variable:  C3372742 strand: - 39112-39181 alnlen 69 mutations 7 involve-A 7 involve-T 0

3437       TGCCGGGCTTTCGTACGCGAATACGAATAACACGGCTACGAATACGAATGCGAATATCGGCTCTCAGCT (revcomp)
           :::::::::::::: :::: ::::: ::: : :::::::::::::: :::::::::::::::::: :::
39181      TGCCGGGCTTTCGTGCGCGGATACGTATACCGCGGCTACGAATACGTATGCGAATATCGGCTCTCGGCT (revcomp)