Template:  C3640976 strand: + 2005-2181 ref: 1999-2180
Variable:  C3640976 strand: + 197-373 alnlen 176 mutations 21 involve-A 20 involve-T 1

2005       TCCTGCTTCGGGTTTCCGCAACAACAGCGATGGGTCGTTGAACAATGTTGGGAACAACGGTTACTATTGGTCGGCAGTTCCGAACAACACGAACAACGGTTGCAACCTGAACTTCAACTGGAGCAACGTGAACCCTCAGAACAACAACAACCGTTCGTACGGGTTTGCGGCACGGC 
           ::::::::::::::::::: :::::::::::::::::: :: :: ::::::: :: :::::: :::::::::::: ::::::: : :::::: :  ::::::::::::: ::::: :::::::: :::::: :::::::  :::::::: :::::::: :::::::::::::::::
197        TCCTGCTTCGGGTTTCCGCTACAACAGCGATGGGTCGTGGAGCAGTGTTGGGGACTACGGTTGCTATTGGTCGGCGGTTCCGAGCTACACGAGCGGCGGTTGCAACCTGTACTTCTACTGGAGCGACGTGAGCCCTCAGGGCAACAACAGCCGTTCGTGCGGGTTTGCGGCACGGC