Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  C4249812 strand: + 2333-2458 ref: 2333-2458

Variable:  C4249812 strand: + 47-172 alnlen 125 mutations 17 involve-A 15 involve-T 1

TTCTAGCAATAACCGTGTTCTTCGTGGATATAACTACAACACTAATTCTGACAACTGGTATACTGGCAACCGTAGTAACAACAATCCTACTAACTCCAACGATAACTATGGTTCGCGTGTTGGCT (Template)
TTTTAGCAATAGCCGTGGTCTTCGTGGATATGCCTACTTCACTATTTCTGACAGCTGGTATGCTGGCTACCGTAGTAACGACTATCCTACTTACTCCTACGATCGCTATGGTTCGCGTGTTGGCT (Variable)