Template:  SRS012273_Baylor_scaffold_8246 strand: - 8310-8410 ref: 8311-8411
Variable:  SRS012273_Baylor_scaffold_8246 strand: - 6183-6283 alnlen 100 mutations 16 involve-A 16 involve-T 0

8410       CGCCGAATTCCGGCAATTCGTACAACGTGCGCAATGTCAATTCTTCGGGCGCGTTGAACAACAACAACGCGTACAACGGCAATAGGGGCGTGCGCCCGCT (revcomp)
           ::::: :::::::: ::::::::  :::::::  ::::  ::::::::::::::::::: :: ::  ::::::: :::::  : ::::::::::::::::
6283       CGCCGTATTCCGGCTATTCGTACGTCGTGCGCTGTGTCCTTTCTTCGGGCGCGTTGAACTACGACTTCGCGTACCACGGCGTTGGGGGCGTGCGCCCGCT (revcomp)
Template:  SRS012273_Baylor_scaffold_8246 strand: - 8330-8410 ref: 8311-8411
Variable:  SRS012273_Baylor_scaffold_8246 strand: - 6297-6377 alnlen 80 mutations 12 involve-A 11 involve-T 1

8410       CGCCGAATTCCGGCAATTCGTACAACGTGCGCAATGTCAATTCTTCGGGCGCGTTGAACAACAACAACGCGTACAACGGC (revcomp)
           ::::: :::::::: ::::: ::: ::::::: ::::: :::::::::::::::::::: ::: : :::::: :  ::::
6377       CGCCGCATTCCGGCTATTCGGACAGCGTGCGCTATGTCGATTCTTCGGGCGCGTTGAACTACAGCTACGCGTGCCGCGGC (revcomp)