Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS012273_Baylor_scaffold_8246 strand: - 8310-8410 ref: 8311-8411

Variable:  SRS012273_Baylor_scaffold_8246 strand: - 6183-6283 alnlen 100 mutations 16 involve-A 16 involve-T 0

CGCCGAATTCCGGCAATTCGTACAACGTGCGCAATGTCAATTCTTCGGGCGCGTTGAACAACAACAACGCGTACAACGGCAATAGGGGCGTGCGCCCGCT (Template)
CGCCGTATTCCGGCTATTCGTACGTCGTGCGCTGTGTCCTTTCTTCGGGCGCGTTGAACTACGACTTCGCGTACCACGGCGTTGGGGGCGTGCGCCCGCT (Variable)
Template:  SRS012273_Baylor_scaffold_8246 strand: - 8330-8410 ref: 8311-8411

Variable:  SRS012273_Baylor_scaffold_8246 strand: - 6297-6377 alnlen 80 mutations 12 involve-A 11 involve-T 1

CGCCGAATTCCGGCAATTCGTACAACGTGCGCAATGTCAATTCTTCGGGCGCGTTGAACAACAACAACGCGTACAACGGC (Template)
CGCCGCATTCCGGCTATTCGGACAGCGTGCGCTATGTCGATTCTTCGGGCGCGTTGAACTACAGCTACGCGTGCCGCGGC (Variable)