Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS013687_Baylor_scaffold_43495 strand: + 33143-33257 ref: 33143-33257

Variable:  SRS013687_Baylor_scaffold_43495 strand: + 32924-33038 alnlen 114 mutations 25 involve-A 25 involve-T 0

TTACCCATCTTGGTAGTAATTGGAATAACAGTTCTAAAACTGGTACTTTCTATTGGAATCTTAATAATGCTACTTCTAATCGTAATCGTAATATCAGCGGTCACCTAGTAAATG (Template)
TTGCCCGTCTTGGTGGTGATTGGGGTAGCGGTTCTAGGGCTGGTGCTTTCTATTGGCATCTTCATTATGCTGCTTCTGATCGTACTCGTGGTATCGGCGGTCGCCTGGTGTATG (Variable)