Template: SRS013951_WUGC_scaffold_59596 strand: + 17550-17651 ref: 17550-17651 Variable: SRS013951_WUGC_scaffold_59596 strand: + 17340-17441 alnlen 101 mutations 21 involve-A 21 involve-T 0 17550 ACACTCATCGTTAGCAGCAACGCTAATAATGGTAGTAATGCCAGTCTTAGTAACTTCAATTCTAACAATGGAGTCAGCAATGTCAATTCCAATGTAGGCTT :: ::::::::: :: :: :::: :::::::: :::::::: ::::: ::: ::::: :::: :: ::: ::: ::: :::: ::::: ::: ::::: 17340 ACGCTCATCGTTGGCGGCCGCGCTGATAATGGTGGTAATGCCGGTCTTGGTAGCTTCACTTCTGACTCTGGGGTCGGCATTGTCCATTCCTCTGTGGGCTT