Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS013951_WUGC_scaffold_64263 strand: - 1187-1260 ref: 1188-1260

Variable:  SRS013951_WUGC_scaffold_64263 strand: - 2311-2384 alnlen 73 mutations 10 involve-A 9 involve-T 0

CCGTTGTTGCTCCATCCGGCAATATCAACAACAACAATTACAACAACAGCAACGGTGTTCGCCCATTCTGTAT (Template)
CCGTTGTTGCTCCATCCGGCAATTTCAGCATCAGCAGTTACGACGGCAGCAACGGTGTTCGCCCGTTTTGTAT (Variable)
Template:  SRS013951_WUGC_scaffold_64263 strand: - 1187-1259 ref: 1188-1260

Variable:  SRS013951_WUGC_scaffold_64263 strand: - 1694-1766 alnlen 72 mutations 14 involve-A 13 involve-T 0

CGTTGTTGCTCCATCCGGCAATATCAACAACAACAATTACAACAACAGCAACGGTGTTCGCCCATTCTGTAT (Template)
CGTTGTTGCTCCGTCCGGCGATATCGGCCGCAGCATTTACTGCAACTGCGACGGTGTTCGCCCGTTTTGTAT (Variable)