Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS013951_WUGC_scaffold_69149 strand: + 41531-41636 ref: 41522-41636

Variable:  SRS013951_WUGC_scaffold_69149 strand: + 2164-2269 alnlen 105 mutations 13 involve-A 13 involve-T 0

TATCGCGGGGGCAACTGGAACAACGGTGCGAACGCTGGTGTGTTCTACCTCAACGGCAACAACTCCCGCAGCAATGCGAACACGAACATCGGCTTCCGTGCCGCT (Template)
TATCGCGGGGGCAACTGGAACAGCGGTGCGTACGCTGGTGTGTTCTCCCTCTACGGCGCCTACTCCCGCAGCCATGCGGGCACGTCCGTCGGCTTCCGTGCCGCT (Variable)
Template:  SRS013951_WUGC_scaffold_69149 strand: + 41522-41636 ref: 41522-41636

Variable:  SRS013951_WUGC_scaffold_69149 strand: + 40939-41053 alnlen 114 mutations 18 involve-A 18 involve-T 0

CGCTGCGTGTATCGCGGGGGCAACTGGAACAACGGTGCGAACGCTGGTGTGTTCTACCTCAACGGCAACAACTCCCGCAGCAATGCGAACACGAACATCGGCTTCCGTGCCGCT (Template)
CGCTGCGTGTTTCGCGGGGGCAACTGGGGCGGCGGTGCGAACGCTGGTGTGTTCTGCCTCGACGGCGCCGGCTCCCGCGGCGGTGCGGGCACGGACCTCGGCTTCCGTGCCGCT (Variable)