Template: SRS014459_WUGC_scaffold_31762 strand: + 44412-44528 ref: 44412-44528 Variable: SRS014459_WUGC_scaffold_31762 strand: + 43735-43851 alnlen 116 mutations 10 involve-A 10 involve-T 0 44412 CGTTTGCCGATTTGTGGGGGCAACTGGAACAACACTTCCAACGCTGGTGTGTTCAATGTGAACCTGAACAACCCTCGGTCCAACTCCAACAGCAATGTTGGCTTTCGCTCCGCTTT ::::::::::::::::::::: :::::: : :::::::: :::::::::::::::::::::::::: :: ::::::::::::::::: :::: ::::::::::::::::::::: 43735 CGTTTGCCGATTTGTGGGGGCTACTGGAGCGACACTTCCTACGCTGGTGTGTTCAATGTGAACCTGCACGACCCTCGGTCCAACTCCTCCAGCGGTGTTGGCTTTCGCTCCGCTTT Template: SRS014459_WUGC_scaffold_31762 strand: + 44412-44527 ref: 44412-44528 Variable: SRS014459_WUGC_scaffold_31762 strand: + 60116-60231 alnlen 115 mutations 14 involve-A 14 involve-T 0 44412 CGTTTGCCGATTTGTGGGGGCAACTGGAACAACACTTCCAACGCTGGTGTGTTCAATGTGAACCTGAACAACCCTCGGTCCAACTCCAACAGCAATGTTGGCTTTCGCTCCGCTT ::::::::::::::::::::: ::::::::: ::::::: :::::::::::::: :::: ::::: ::: :::::::::: ::::: : :: :::::::::::::::::::: 60116 CGTTTGCCGATTTGTGGGGGCTACTGGAACAGCACTTCCGACGCTGGTGTGTTCCGTGTGCACCTGGACAGCCCTCGGTCCGACTCCGGCGGCTCTGTTGGCTTTCGCTCCGCTT