Template:  SRS014459_WUGC_scaffold_35466 strand: - 2955-3068 ref: 2956-3069
Variable:  SRS014459_WUGC_scaffold_35466 strand: - 3148-3261 alnlen 113 mutations 20 involve-A 20 involve-T 0

3068       GGGTGTGTTGTTCAGCGGTTCTTCGAATAATGGTGCGAATGCAGGTGTCAGCTACTCGAATACGAATAATACGGCGTCGAATACGAATGCGAATATCGGTTCTCAGCTATGCT (revcomp)
           ::::::::::::: :::::::::::  : ::::::::: ::: :::::: ::: :::: :::::  : ::::::::::: :::::  ::::  : ::::::::: ::: ::::
3261       GGGTGTGTTGTTCGGCGGTTCTTCGTTTGATGGTGCGATTGCGGGTGTCGGCTGCTCGTATACGGCTTATACGGCGTCGTATACGGCTGCGGCTGTCGGTTCTCGGCTTTGCT (revcomp)
Template:  SRS014459_WUGC_scaffold_35466 strand: - 2955-3029 ref: 2956-3069
Variable:  SRS014459_WUGC_scaffold_35466 strand: - 40694-40768 alnlen 74 mutations 16 involve-A 16 involve-T 0

3029       TGCAGGTGTCAGCTACTCGAATACGAATAATACGGCGTCGAATACGAATGCGAATATCGGTTCTCAGCTATGCT (revcomp)
           ::: :::::: ::: :::: :::::  :  :::::::::: :::::  ::::  : ::::::::: ::: ::::
40768      TGCGGGTGTCGGCTTCTCGTATACGTCTTTTACGGCGTCGTATACGTCTGCGCTTTTCGGTTCTCGGCTTTGCT (revcomp)