Template:  SRS014613_WUGC_scaffold_13308 strand: - 3835-3949 ref: 3836-3950
Variable:  SRS014613_WUGC_scaffold_13308 strand: - 4029-4143 alnlen 114 mutations 12 involve-A 12 involve-T 0

3949       GGGGTGTGTTGTTCAGCGGTTCTTCGAATAATGGTGCGAATGCAGGTGTCAGCTACTCGAATACGAATAATACGGCGTCGAATACGAATGCGAATATCGGTTCTCAGCTATGCT (revcomp)
           :::::::::::::: :::::::::::::: ::::::::: ::: :::::: ::::::::::::::::: :: :::::::: ::::::::::: :: ::::::::: ::: ::::
4143       GGGGTGTGTTGTTCGGCGGTTCTTCGAATGATGGTGCGAGTGCGGGTGTCGGCTACTCGAATACGAATGATGCGGCGTCGTATACGAATGCGTATGTCGGTTCTCGGCTTTGCT (revcomp)
Template:  SRS014613_WUGC_scaffold_13308 strand: - 3835-3909 ref: 3836-3950
Variable:  SRS014613_WUGC_scaffold_13308 strand: - 40928-41002 alnlen 74 mutations 14 involve-A 14 involve-T 0

3909       TGCAGGTGTCAGCTACTCGAATACGAATAATACGGCGTCGAATACGAATGCGAATATCGGTTCTCAGCTATGCT (revcomp)
           ::: :::::: ::: ::::  : ::::: ::::::::::: ::::: :::::  : ::::::::: ::: ::::
41002      TGCGGGTGTCGGCTGCTCGGCTGCGAATTATACGGCGTCGTATACGTATGCGTTTTTCGGTTCTCGGCTTTGCT (revcomp)