Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS014613_WUGC_scaffold_13308 strand: - 3835-3949 ref: 3836-3950

Variable:  SRS014613_WUGC_scaffold_13308 strand: - 4029-4143 alnlen 114 mutations 12 involve-A 12 involve-T 0

GGGGTGTGTTGTTCAGCGGTTCTTCGAATAATGGTGCGAATGCAGGTGTCAGCTACTCGAATACGAATAATACGGCGTCGAATACGAATGCGAATATCGGTTCTCAGCTATGCT (Template)
GGGGTGTGTTGTTCGGCGGTTCTTCGAATGATGGTGCGAGTGCGGGTGTCGGCTACTCGAATACGAATGATGCGGCGTCGTATACGAATGCGTATGTCGGTTCTCGGCTTTGCT (Variable)
Template:  SRS014613_WUGC_scaffold_13308 strand: - 3835-3909 ref: 3836-3950

Variable:  SRS014613_WUGC_scaffold_13308 strand: - 40928-41002 alnlen 74 mutations 14 involve-A 14 involve-T 0

TGCAGGTGTCAGCTACTCGAATACGAATAATACGGCGTCGAATACGAATGCGAATATCGGTTCTCAGCTATGCT (Template)
TGCGGGTGTCGGCTGCTCGGCTGCGAATTATACGGCGTCGTATACGTATGCGTTTTTCGGTTCTCGGCTTTGCT (Variable)