Template: SRS014923_WUGC_scaffold_16003 strand: + 38876-38990 ref: 38876-38990 Variable: SRS014923_WUGC_scaffold_16003 strand: + 38293-38407 alnlen 114 mutations 17 involve-A 17 involve-T 0 38876 CGCTGCGTGTATCGCGGGGGCAACTGGAACAACGGTGCGAACGCTGGTGTGTTCTACCTCAACGGCAACAACTCCCGCAGCAATGCGAACACGAACATCGGCTTCCGTGCCGCT ::::::::::::::::::::: :::: :: ::::::: :::::::::::::: ::::: :::: :::::::::::::: :::: : :: :: ::::::::::::::::: 38293 CGCTGCGTGTATCGCGGGGGCGGCTGGGGCAGCGGTGCGCGCGCTGGTGTGTTCTGCCTCAGCGGCGACAACTCCCGCAGCCTTGCGGGCGCGTACCTCGGCTTCCGTGCCGCT Template: SRS014923_WUGC_scaffold_16003 strand: + 38885-38990 ref: 38876-38990 Variable: SRS014923_WUGC_scaffold_16003 strand: + 262-367 alnlen 105 mutations 15 involve-A 15 involve-T 0 38885 TATCGCGGGGGCAACTGGAACAACGGTGCGAACGCTGGTGTGTTCTACCTCAACGGCAACAACTCCCGCAGCAATGCGAACACGAACATCGGCTTCCGTGCCGCT :::::::::::: ::::: :: ::::::: ::::::::::::::: :::::::::: ::::::::::: :: ::::: : :: : ::::::::::::::::: 262 TATCGCGGGGGCCACTGGGGCAGCGGTGCGGACGCTGGTGTGTTCTCCCTCAACGGCTACAACTCCCGCGGCCTTGCGAGCGCGGGCCTCGGCTTCCGTGCCGCT