Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS014923_WUGC_scaffold_16003 strand: + 38876-38990 ref: 38876-38990

Variable:  SRS014923_WUGC_scaffold_16003 strand: + 38293-38407 alnlen 114 mutations 17 involve-A 17 involve-T 0

CGCTGCGTGTATCGCGGGGGCAACTGGAACAACGGTGCGAACGCTGGTGTGTTCTACCTCAACGGCAACAACTCCCGCAGCAATGCGAACACGAACATCGGCTTCCGTGCCGCT (Template)
CGCTGCGTGTATCGCGGGGGCGGCTGGGGCAGCGGTGCGCGCGCTGGTGTGTTCTGCCTCAGCGGCGACAACTCCCGCAGCCTTGCGGGCGCGTACCTCGGCTTCCGTGCCGCT (Variable)
Template:  SRS014923_WUGC_scaffold_16003 strand: + 38885-38990 ref: 38876-38990

Variable:  SRS014923_WUGC_scaffold_16003 strand: + 262-367 alnlen 105 mutations 15 involve-A 15 involve-T 0

TATCGCGGGGGCAACTGGAACAACGGTGCGAACGCTGGTGTGTTCTACCTCAACGGCAACAACTCCCGCAGCAATGCGAACACGAACATCGGCTTCCGTGCCGCT (Template)
TATCGCGGGGGCCACTGGGGCAGCGGTGCGGACGCTGGTGTGTTCTCCCTCAACGGCTACAACTCCCGCGGCCTTGCGAGCGCGGGCCTCGGCTTCCGTGCCGCT (Variable)