Template: SRS014923_WUGC_scaffold_17878 strand: - 3357-3465 ref: 3354-3466 Variable: SRS014923_WUGC_scaffold_17878 strand: - 3902-4010 alnlen 108 mutations 14 involve-A 14 involve-T 0 3465 GGGTGTCTTGTTCGGCGGTAATGCGAATAACAGCGCGAATGCCGGGCTTTCGTACGCGAATACGAATAACACGGCTACGAATACGAATGCGAATATCGGCTCTCAGCT (revcomp) ::::::::::::::::::: :::: :::: ::::: ::::::::::::::::::: ::::: ::::: ::::: :: ::::: :::::::::::::::::: ::: 4010 GGGTGTCTTGTTCGGCGGTTCTGCGGCTAACGGCGCGGCTGCCGGGCTTTCGTACGCGCATACGCATAACGCGGCTTCGTATACGCATGCGAATATCGGCTCTCGGCT (revcomp) Template: SRS014923_WUGC_scaffold_17878 strand: - 3357-3428 ref: 3354-3466 Variable: SRS014923_WUGC_scaffold_17878 strand: - 42091-42162 alnlen 71 mutations 9 involve-A 9 involve-T 0 3428 AATGCCGGGCTTTCGTACGCGAATACGAATAACACGGCTACGAATACGAATGCGAATATCGGCTCTCAGCT (revcomp) :::::::::::::::: :::: :::::: :::: :::::::: :::::: :::: ::::::::::: ::: 42162 AATGCCGGGCTTTCGTGCGCGTATACGATTAACGCGGCTACGTATACGACTGCGTCTATCGGCTCTCGGCT (revcomp) Template: SRS014923_WUGC_scaffold_17878 strand: - 3357-3426 ref: 3354-3466 Variable: SRS014923_WUGC_scaffold_17878 strand: - 39101-39170 alnlen 69 mutations 11 involve-A 11 involve-T 0 3426 TGCCGGGCTTTCGTACGCGAATACGAATAACACGGCTACGAATACGAATGCGAATATCGGCTCTCAGCT (revcomp) :::::::::::::: :::: ::::: ::: : :::::::: :: :: ::::: ::::::::::: ::: 39170 TGCCGGGCTTTCGTGCGCGCATACGCATAGCGCGGCTACGCATTCGTATGCGTCTATCGGCTCTCGGCT (revcomp)