Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS014923_WUGC_scaffold_17878 strand: - 3357-3465 ref: 3354-3466

Variable:  SRS014923_WUGC_scaffold_17878 strand: - 3902-4010 alnlen 108 mutations 14 involve-A 14 involve-T 0

GGGTGTCTTGTTCGGCGGTAATGCGAATAACAGCGCGAATGCCGGGCTTTCGTACGCGAATACGAATAACACGGCTACGAATACGAATGCGAATATCGGCTCTCAGCT (Template)
GGGTGTCTTGTTCGGCGGTTCTGCGGCTAACGGCGCGGCTGCCGGGCTTTCGTACGCGCATACGCATAACGCGGCTTCGTATACGCATGCGAATATCGGCTCTCGGCT (Variable)
Template:  SRS014923_WUGC_scaffold_17878 strand: - 3357-3428 ref: 3354-3466

Variable:  SRS014923_WUGC_scaffold_17878 strand: - 42091-42162 alnlen 71 mutations 9 involve-A 9 involve-T 0

AATGCCGGGCTTTCGTACGCGAATACGAATAACACGGCTACGAATACGAATGCGAATATCGGCTCTCAGCT (Template)
AATGCCGGGCTTTCGTGCGCGTATACGATTAACGCGGCTACGTATACGACTGCGTCTATCGGCTCTCGGCT (Variable)
Template:  SRS014923_WUGC_scaffold_17878 strand: - 3357-3426 ref: 3354-3466

Variable:  SRS014923_WUGC_scaffold_17878 strand: - 39101-39170 alnlen 69 mutations 11 involve-A 11 involve-T 0

TGCCGGGCTTTCGTACGCGAATACGAATAACACGGCTACGAATACGAATGCGAATATCGGCTCTCAGCT (Template)
TGCCGGGCTTTCGTGCGCGCATACGCATAGCGCGGCTACGCATTCGTATGCGTCTATCGGCTCTCGGCT (Variable)