myDGR

myDGR report for SRS015133_WUGC_scaffold_4781

Seq: SRS015133_WUGC_scaffold_4781 (57597 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 3-15621 bp 2 Locus 2: 32949-54332 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 3-386 bp Feature: CDS Location: 770-2245 bp Feature: CDS Location: 2263-2514 bp Feature: CDS Location: 2563-4065 bp Feature: CDS Location: 4093-4446 bp Feature: CDS Location: 4600-4920 bp Feature: target Des: target gene diversified by DGR Location: 5066-5638 bp Feature: CDS Location: 5678-6118 bp Feature: CDS Location: 6162-7466 bp Feature: CDS Location: 7468-7854 bp Feature: CDS Location: 7857-9830 bp Feature: CDS Location: 9887-10015 bp Feature: CDS Location: 10020-10529 bp Feature: CDS Location: 10550-11299 bp Feature: CDS Location: 11313-11552 bp Feature: CDS Location: 11530-12108 bp Feature: CDS Location: 12095-13147 bp Feature: CDS Location: 13144-13509 bp Feature: CDS Location: 13524-14009 bp Feature: CDS Location: 14079-14636 bp Feature: CDS Location: 14644-14841 bp Feature: CDS Location: 14856-14999 bp Feature: CDS Location: 15003-15272 bp Feature: CDS Location: 15286-15621 bp Feature: CDS Location: 32949-33479 bp Feature: CDS Location: 33476-33877 bp Feature: CDS Location: 33883-34308 bp Feature: CDS Location: 34348-34680 bp Feature: CDS Location: 34779-35120 bp Feature: CDS Location: 35124-38576 bp Feature: CDS Location: 38591-38962 bp Feature: CDS Location: 38967-41189 bp Feature: CDS Location: 41203-41634 bp Feature: CDS Location: 41635-42228 bp Feature: target Des: target gene diversified by DGR Location: 42232-43095 bp Feature: accessory Des: PAG3 Location: 43145-43780 bp Feature: RT Des: DGR reverse transcriptase Location: 43827-45029 bp Feature: CDS Location: 45007-45309 bp Feature: CDS Location: 45313-45462 bp Feature: CDS Location: 45467-45895 bp Feature: CDS Location: 45943-47352 bp Feature: CDS Location: 47493-49940 bp Feature: CDS Location: 49924-50955 bp Feature: CDS Location: 50933-51514 bp Feature: CDS Location: 51673-52692 bp Feature: CDS Location: 52698-54332 bp Sorry, your browser does not support inline SVG.