myDGR

myDGR report for SRS015217_WUGC_scaffold_23239

Seq: SRS015217_WUGC_scaffold_23239 (49517 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 18-20273 bp Zoom in on locus 1 Feature: CDS Location: 18-149 bp Feature: CDS Location: 284-493 bp Feature: CDS Location: 496-1761 bp Feature: CDS Location: 1758-2165 bp Feature: CDS Location: 2162-2677 bp Feature: CDS Location: 3064-3357 bp Feature: CDS Location: 3448-4113 bp Feature: CDS Location: 4116-4292 bp Feature: CDS Location: 4300-4701 bp Feature: CDS Location: 4743-5300 bp Feature: CDS Location: 5303-6010 bp Feature: CDS Location: 6039-6455 bp Feature: CDS Location: 6433-6900 bp Feature: CDS Location: 6928-7191 bp Feature: CDS Location: 7194-8369 bp Feature: CDS Location: 8376-8771 bp Feature: accessory Des: PAG1 Location: 8793-9377 bp Feature: CDS Location: 9325-9555 bp Feature: RT Des: DGR reverse transcriptase Location: 9521-10336 bp Feature: CDS Location: 10620-10823 bp Feature: target Des: target gene diversified by DGR Location: 10853-12172 bp Feature: CDS Location: 12193-13215 bp Feature: CDS Location: 13199-13432 bp Feature: CDS Location: 13434-14639 bp Feature: CDS Location: 14636-17506 bp Feature: CDS Location: 17511-18029 bp Feature: CDS Location: 18429-18650 bp Feature: CDS Location: 18650-19117 bp Feature: CDS Location: 19146-19364 bp Feature: CDS Location: 19443-20273 bp Sorry, your browser does not support inline SVG.