Template:  SRS016056_WUGC_scaffold_1971 strand: - 5361-5475 ref: 5362-5476
Variable:  SRS016056_WUGC_scaffold_1971 strand: - 5559-5673 alnlen 114 mutations 20 involve-A 20 involve-T 0

5475       GGGTGTCCTTTTCAGCGGTAATACGAATAATGGCGATCATGCAGGCTTCGGTTATGCGAATACGAATAACACCCCCTCGAATACGAATGCGAATGTCAGCTCTCAGCTATGATT (revcomp)
           ::::::::::::: ::::: ::::: ::  :::::::: :::::::::::::: ::::  :::: :: :: :::::::: :::::  ::::: :::: :::::: ::: :: ::
5673       GGGTGTCCTTTTCGGCGGTTATACGTATTCTGGCGATCTTGCAGGCTTCGGTTCTGCGTCTACGTATTACGCCCCCTCGTATACGTCTGCGATTGTCGGCTCTCGGCTTTGTTT (revcomp)
Template:  SRS016056_WUGC_scaffold_1971 strand: - 5384-5475 ref: 5362-5476
Variable:  SRS016056_WUGC_scaffold_1971 strand: - 5682-5773 alnlen 91 mutations 16 involve-A 15 involve-T 1

5475       GGGTGTCCTTTTCAGCGGTAATACGAATAATGGCGATCATGCAGGCTTCGGTTATGCGAATACGAATAACACCCCCTCGAATACGAATGCG (revcomp)
           ::::::::::::: :::::::: ::  : :::::::::  :: :::::::::: :::: ::::: ::::: :::::::: :: ::  ::::
5773       GGGTGTCCTTTTCGGCGGTAATGCGTCTGATGGCGATCCGGCGGGCTTCGGTTCTGCGTATACGGATAACGCCCCCTCGTATGCGCTTGCG (revcomp)