Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS016056_WUGC_scaffold_1971 strand: - 5361-5475 ref: 5362-5476

Variable:  SRS016056_WUGC_scaffold_1971 strand: - 5559-5673 alnlen 114 mutations 20 involve-A 20 involve-T 0

GGGTGTCCTTTTCAGCGGTAATACGAATAATGGCGATCATGCAGGCTTCGGTTATGCGAATACGAATAACACCCCCTCGAATACGAATGCGAATGTCAGCTCTCAGCTATGATT (Template)
GGGTGTCCTTTTCGGCGGTTATACGTATTCTGGCGATCTTGCAGGCTTCGGTTCTGCGTCTACGTATTACGCCCCCTCGTATACGTCTGCGATTGTCGGCTCTCGGCTTTGTTT (Variable)
Template:  SRS016056_WUGC_scaffold_1971 strand: - 5384-5475 ref: 5362-5476

Variable:  SRS016056_WUGC_scaffold_1971 strand: - 5682-5773 alnlen 91 mutations 16 involve-A 15 involve-T 1

GGGTGTCCTTTTCAGCGGTAATACGAATAATGGCGATCATGCAGGCTTCGGTTATGCGAATACGAATAACACCCCCTCGAATACGAATGCG (Template)
GGGTGTCCTTTTCGGCGGTAATGCGTCTGATGGCGATCCGGCGGGCTTCGGTTCTGCGTATACGGATAACGCCCCCTCGTATGCGCTTGCG (Variable)