Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS016095_WUGC_scaffold_20077 strand: - 46342-46501 ref: 46341-46502

Variable:  SRS016095_WUGC_scaffold_20077 strand: - 47736-47895 alnlen 159 mutations 18 involve-A 18 involve-T 0

ACAATAACGGGCAGTTGAACAACGTGGGCAACAACGGCAACTATTGGTCGGGCTCGCCGAACGGTACGAACGGGTATAACCTGAACTTCAACAATGGTAACGTGAACCCGGCGAACAACAACAACCGCTCGAACGGCTTCTCCGTGAGGTGTGTTGCAG (Template)
ACAATAACGGGCAGTTGAGCAACGTGGGCCTCTACGGCTACTATTGGTCGGGCTCGCCGTACGGTACGTTCGGGTCTTACCTGTGCTTCGACAATGGTTACGTGTACCCGGCGAGCAACTACAACCGCTCGTACGGCTTCTCCGTGAGGTGTGTTGCAG (Variable)
Template:  SRS016095_WUGC_scaffold_20077 strand: - 46404-46496 ref: 46341-46502

Variable:  SRS016095_WUGC_scaffold_20077 strand: - 50825-50917 alnlen 92 mutations 20 involve-A 11 involve-T 1

AACGGGCAGTTGAACAACGTGGGCAACAACGGCAACTATTGGTCGGGCTCGCCGAACGGTACGAACGGGTATAACCTGAACTTCAACAATGG (Template)
AATGGGCAGTTGTACAACGTGGGCTACTACGGCTACTATTGGTCGGGGTCTCCTAACAGTATAAGCGGGTACTCCTTGTACTTCCTCAGTGG (Variable)