Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS016335_WUGC_scaffold_11952 strand: - 29-110 ref: 30-111

Variable:  SRS016335_WUGC_scaffold_11952 strand: - 1977-2058 alnlen 81 mutations 9 involve-A 8 involve-T 1

TATGTCTGAGACGGTGGTTCTGCGAGGTGGTAACAACAACAACAACAATCCCGCAGGTAACCGCTGGGACAATAATTCTGG (Template)
TACGTCTGAGACGGTGGTTCTGCGAGGTGGTGACAGCTACGACAACTTTCCCGCAGGTCACCGCTGGGACAATATTTCTGG (Variable)