Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS016335_WUGC_scaffold_42665 strand: - 4150-4264 ref: 4151-4265

Variable:  SRS016335_WUGC_scaffold_42665 strand: - 4352-4466 alnlen 114 mutations 15 involve-A 13 involve-T 2

TGGTGCCCTTTTGTCTGCTAATGCGAATAATGGTGCGAATGCGGGTTTCGGTTATCTGAATGCGAATAATCGTTCCTCGAATGCGAATGCGAACATTGGGTTCCGCTTTTACCG (Template)
TGGTGCCCTTTTGTCTGCTGGTGCGAATGCTGGTGCGACTGCGGGTTTCGGTTATCTGTATGCGAGGCATCGTTCCTCGCATGCGCATGCGTACTTTGGGTTCCGCTTGTGCCG (Variable)
Template:  SRS016335_WUGC_scaffold_42665 strand: - 4151-4263 ref: 4151-4265

Variable:  SRS016335_WUGC_scaffold_42665 strand: - 46793-46905 alnlen 112 mutations 15 involve-A 14 involve-T 1

GGTGCCCTTTTGTCTGCTAATGCGAATAATGGTGCGAATGCGGGTTTCGGTTATCTGAATGCGAATAATCGTTCCTCGAATGCGAATGCGAACATTGGGTTCCGCTTTTACC (Template)
GGTGCCCTTTTGTCTGCTGCTGCGGCTTATGGTGCGTCTGCGGGTTTCGGTTATCTGAATGCGATTGTTCGTTCCTCGGCTGCGAATGCGTACATTGGGTTCCGCTTGTGCC (Variable)