Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS017307_Baylor_scaffold_25643 strand: + 15232-15346 ref: 15232-15346

Variable:  SRS017307_Baylor_scaffold_25643 strand: + 14601-14715 alnlen 114 mutations 15 involve-A 15 involve-T 0

CGTTTGCCGATTTGCGGGGGCAACTGGAACAATGGTGCCAACGCTGGTGTCTTCAACTTGAACCTCAACAATCCCCGCTCCAATGCGAACTGGAACATCGGTTTCCGCTCCGCT (Template)
CGTTTGCCGGTTTGCGGGGGCGGCTGGGCCCATGGTGCCGACGCTGGTGTCTTCGACTTGAACCTCACCACTCCCCGCTCCACTGCGGGCTGGAGCGTCGGTTTCCGCTCCGCT (Variable)