myDGR

myDGR report for SRS017521_Baylor_scaffold_17890

Seq: SRS017521_Baylor_scaffold_17890 (78708 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 196-18319 bp 2 Locus 2: 45779-67415 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 196-1446 bp Feature: CDS Location: 1576-1893 bp Feature: CDS Location: 1919-2077 bp Feature: CDS Location: 2178-2429 bp Feature: CDS Location: 2432-2851 bp Feature: CDS Location: 2853-3062 bp Feature: CDS Location: 3096-3431 bp Feature: CDS Location: 3563-3787 bp Feature: CDS Location: 3836-4303 bp Feature: CDS Location: 4484-4798 bp Feature: CDS Location: 4860-5219 bp Feature: CDS Location: 5278-5499 bp Feature: CDS Location: 5578-6006 bp Feature: CDS Location: 6029-6316 bp Feature: CDS Location: 6303-7082 bp Feature: CDS Location: 7128-7298 bp Feature: CDS Location: 7335-7625 bp Feature: target Des: target gene diversified by DGR Location: 7660-8511 bp Feature: CDS Location: 8511-9281 bp Feature: CDS Location: 9353-9619 bp Feature: CDS Location: 9702-9908 bp Feature: CDS Location: 9908-10510 bp Feature: CDS Location: 10526-10777 bp Feature: CDS Location: 10780-11739 bp Feature: CDS Location: 11807-12373 bp Feature: CDS Location: 12647-13249 bp Feature: CDS Location: 13246-13794 bp Feature: CDS Location: 13805-14017 bp Feature: CDS Location: 14019-14252 bp Feature: CDS Location: 14261-18319 bp Feature: CDS Location: 45779-46156 bp Feature: CDS Location: 46186-52401 bp Feature: CDS Location: 52596-53312 bp Feature: CDS Location: 53315-54385 bp Feature: CDS Location: 54406-55536 bp Feature: target Des: target gene diversified by DGR Location: 55557-56528 bp Feature: CDS Location: 56625-56933 bp Feature: CDS Location: 56948-57091 bp Feature: accessory Des: PAG3 Location: 57088-57573 bp Feature: RT Des: DGR reverse transcriptase Location: 57784-58980 bp Feature: CDS Location: 58999-59322 bp Feature: CDS Location: 59335-59628 bp Feature: CDS Location: 59681-60262 bp Feature: CDS Location: 60276-60527 bp Feature: CDS Location: 60835-61233 bp Feature: CDS Location: 61365-62087 bp Feature: CDS Location: 62089-62949 bp Feature: CDS Location: 62930-63313 bp Feature: CDS Location: 63488-64507 bp Feature: CDS Location: 64510-64713 bp Feature: CDS Location: 64762-64899 bp Feature: CDS Location: 64936-65166 bp Feature: CDS Location: 65272-66228 bp Feature: CDS Location: 66263-67024 bp Feature: CDS Location: 67254-67415 bp Sorry, your browser does not support inline SVG.