Template: SRS017521_Baylor_scaffold_30298 strand: - 9999-10121 ref: 10000-10122 Variable: SRS017521_Baylor_scaffold_30298 strand: - 10184-10306 alnlen 122 mutations 21 involve-A 20 involve-T 0 10121 GTTCTTCGTGGTGTTCTGTTCAGCGGTAATGCGAATAACGGTGCGAATGCAGGCTTCAGCTATGCGAATTCGAATAACACCCCCTCGAATACGAATGCGAACATCGGCTCTCACCTCTGATT (revcomp) ::::::::::::::::::::: ::::: :::: :: :::::::: :::: :::::: ::: ::::: :::: :::: :::::::::::::: :::: : ::::::::: ::: :: :: 10306 GTTCTTCGTGGTGTTCTGTTCGGCGGTTCTGCGTATTACGGTGCGGATGCGGGCTTCGGCTGTGCGACTTCGGCTAACGCCCCCTCGAATACGTCTGCGTCCGTCGGCTCTCGCCTTTGCTT (revcomp)