Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS017821_Baylor_scaffold_3398 strand: + 700-815 ref: 700-815

Variable:  SRS017821_Baylor_scaffold_3398 strand: + 152-267 alnlen 115 mutations 21 involve-A 20 involve-T 1

CGGTGTCCTGTTCAGCGGTAATGCGAATAACAGCTCGAATGCCGGTTTTGCGTATGCGAATTCGAATAACACGCCCTCGAATACGAATGCGAATATCAGGTCTCGCCAATGATTT (Template)
CGGCGTCCTGTTCGGCGGTCATGCGTATAACGGCTCGAATGCCGGTTTTGCGTCTGCGCATTCGGCTTGCACGCCCTCGTATACGTCTGCGGCTGTCGGGTCTCGCCTTTGCTTT (Variable)