Template: SRS019161_WUGC_scaffold_35145 strand: + 47109-47221 ref: 47109-47221 Variable: SRS019161_WUGC_scaffold_35145 strand: + 46567-46679 alnlen 112 mutations 17 involve-A 16 involve-T 1 47109 GGTGTCTTGTTCGGCGGTAATGCGAATAACAGCGCGAATGCCGGGCTTTCGTACGCGAATACGAATAACACGGCTACGAATACGAATGCGAATATCGGCTCTCAGCTATACT :::::::::::::::::: :::: ::::: ::::::::::::::::::::: :::: ::::::: :: :::: ::: ::::: :::: :::::::::::: ::: : :: 46567 GGTGTCTTGTTCGGCGGTTCTGCGCATAACGGCGCGAATGCCGGGCTTTCGTGCGCGCTTACGAATTACGCGGCGACGTCTACGAGTGCGTATATCGGCTCTCGGCTTTGCT Template: SRS019161_WUGC_scaffold_35145 strand: + 47147-47221 ref: 47109-47221 Variable: SRS019161_WUGC_scaffold_35145 strand: + 11406-11480 alnlen 74 mutations 8 involve-A 8 involve-T 0 47147 TGCCGGGCTTTCGTACGCGAATACGAATAACACGGCTACGAATACGAATGCGAATATCGGCTCTCAGCTATACT ::::::::::::::::::: :: :: ::::: ::::: ::::::::::::::: ::::::::::::::: : :: 11406 TGCCGGGCTTTCGTACGCGGATGCGTATAACGCGGCTGCGAATACGAATGCGACTATCGGCTCTCAGCTTTGCT Template: SRS019161_WUGC_scaffold_35145 strand: + 47145-47221 ref: 47109-47221 Variable: SRS019161_WUGC_scaffold_35145 strand: + 8476-8552 alnlen 76 mutations 10 involve-A 10 involve-T 0 47145 AATGCCGGGCTTTCGTACGCGAATACGAATAACACGGCTACGAATACGAATGCGAATATCGGCTCTCAGCTATACT :::::::::::::::: :::: ::::::::::: ::::: ::: ::::: :::: :::::::::::: ::: : :: 8476 AATGCCGGGCTTTCGTGCGCGTATACGAATAACGCGGCTCCGACTACGACTGCGCATATCGGCTCTCGGCTTTGCT