Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS019161_WUGC_scaffold_35145 strand: + 47109-47221 ref: 47109-47221

Variable:  SRS019161_WUGC_scaffold_35145 strand: + 46567-46679 alnlen 112 mutations 17 involve-A 16 involve-T 1

GGTGTCTTGTTCGGCGGTAATGCGAATAACAGCGCGAATGCCGGGCTTTCGTACGCGAATACGAATAACACGGCTACGAATACGAATGCGAATATCGGCTCTCAGCTATACT (Template)
GGTGTCTTGTTCGGCGGTTCTGCGCATAACGGCGCGAATGCCGGGCTTTCGTGCGCGCTTACGAATTACGCGGCGACGTCTACGAGTGCGTATATCGGCTCTCGGCTTTGCT (Variable)
Template:  SRS019161_WUGC_scaffold_35145 strand: + 47147-47221 ref: 47109-47221

Variable:  SRS019161_WUGC_scaffold_35145 strand: + 11406-11480 alnlen 74 mutations 8 involve-A 8 involve-T 0

TGCCGGGCTTTCGTACGCGAATACGAATAACACGGCTACGAATACGAATGCGAATATCGGCTCTCAGCTATACT (Template)
TGCCGGGCTTTCGTACGCGGATGCGTATAACGCGGCTGCGAATACGAATGCGACTATCGGCTCTCAGCTTTGCT (Variable)
Template:  SRS019161_WUGC_scaffold_35145 strand: + 47145-47221 ref: 47109-47221

Variable:  SRS019161_WUGC_scaffold_35145 strand: + 8476-8552 alnlen 76 mutations 10 involve-A 10 involve-T 0

AATGCCGGGCTTTCGTACGCGAATACGAATAACACGGCTACGAATACGAATGCGAATATCGGCTCTCAGCTATACT (Template)
AATGCCGGGCTTTCGTGCGCGTATACGAATAACGCGGCTCCGACTACGACTGCGCATATCGGCTCTCGGCTTTGCT (Variable)