Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS019582_WUGC_scaffold_9518 strand: - 4342-4500 ref: 4341-4500

Variable:  SRS019582_WUGC_scaffold_9518 strand: - 5786-5944 alnlen 158 mutations 16 involve-A 16 involve-T 0

CGACGGTAGCATGAGCAACGTGGGCAGCAACGGCAACTATTGGAGTGCATCGCCGAACAGCGAGAATAACGGTTACAACTTGAACTTCAACAGTGGCAACGTGAATCCTGCGAACAACAACAATCGAGCAAACGGTTTCTCCGTGCGCTGTGTCCAAG (Template)
CGACGGTGGCATGAGCAGCGTGGGCAGCAACGGCTACTGTTGGAGTGCGTCGCCGAACAGCGAGAATTTCGGTTACTACTTGTACTTCCACAGTGGCAGCGTGTATCCTGCGAGCTACAACAATCGAGCGTACGGTTTCTCCGTGCGCTGTGTCCAAG (Variable)
Template:  SRS019582_WUGC_scaffold_9518 strand: - 4381-4500 ref: 4341-4500

Variable:  SRS019582_WUGC_scaffold_9518 strand: - 5981-6100 alnlen 119 mutations 10 involve-A 9 involve-T 1

CGACGGTAGCATGAGCAACGTGGGCAGCAACGGCAACTATTGGAGTGCATCGCCGAACAGCGAGAATAACGGTTACAACTTGAACTTCAACAGTGGCAACGTGAATCCTGCGAACAACA (Template)
CGACGGTAGCATGAGCAACGTGGGCAGCGGCGGCAACTATTGGAGTGCAGCGCCGAGCAGCGAGAATAACGGTTACAGCTTGTACTTCAGCAGTGGCTACGTGAGTCCTGCGTACAACA (Variable)