Template: SRS022609_Baylor_scaffold_27140 strand: + 936-1051 ref: 936-1051 Variable: SRS022609_Baylor_scaffold_27140 strand: + 1-116 alnlen 115 mutations 22 involve-A 21 involve-T 0 936 GGCTGGTTCTGGTCGTCTTCGGAGAACAACGCTAACAACGCGTACAACGTGAACTTCAACAATGGCAACACGAACAACAACAACAAGAACAACAGCAACAATAGGGTCTTGTGTA :::::::::::::::::::::::: :: :::: :: :::::::: :::: ::::: :::::::: ::: : :: :: ::::: :: ::::: :: :::::::::::::: 1 GGCTGGTTCTGGTCGTCTTCGGAGGGCAGCGCTTACGACGCGTACCTCGTGTACTTCGGCAATGGCACGCCGAGCTACGACGGCAAGACCAGCAGCACCAGTAGGGTCTTGTGTA