Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS023352_LANL_scaffold_21098 strand: - 1529-1714 ref: 1528-1715

Variable:  SRS023352_LANL_scaffold_21098 strand: - 3337-3522 alnlen 185 mutations 10 involve-A 10 involve-T 0

TCCTGCTTCGGGTTTCCGCAACAACAGCGATGGGTCGTTGAACAATGTTGGGAACAACGGTTACTATTGGTCGGCAGTTCCGAACAACACGAACAACGGTTGCAACCTGAACTTCAACTGGAGCAACGTGAACCCTCAGAACAACAACAACCGTTCGTACGGGTTTGCGGCACGGCCAGTCTCAG (Template)
TCCTGCTTCGGGTTTCCGCAACTACAGCGATGGGTCGTTGAACGATGTTGGGAACTACGGTTACTATTGGTCGGCAGTTCCGCTCAACACGAACTACGGTTGCTACCTGAACTTCTACTGGAGCAACGTGAACCCTCAGTACAACTACAACCGTTCGTACGGGTTTGCGGCACGGCCAGTCTCAG (Variable)