Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS023583_Baylor_scaffold_6064 strand: - 7572-7686 ref: 7573-7687

Variable:  SRS023583_Baylor_scaffold_6064 strand: - 7770-7884 alnlen 114 mutations 22 involve-A 22 involve-T 0

GGGTGTCCTTTTCAGCGGTAATACGAATAATGGCGATCATGCAGGCTTCGGTTATGCGAATACGAATAACACCCCCTCGAATACGAATGCGAATGTCAGCTCTCAGCTATGATT (Template)
GGGTGTCCTTTTCGGCGGTGCTGCGTCTGATGGCGATCTTGCGGGCTTCGGTTATGCGGGTACGGATAGCGCCCCCTCGCATACGGCTGCGTATGTCGGCTCTCGGCTTTGTTT (Variable)
Template:  SRS023583_Baylor_scaffold_6064 strand: - 7575-7651 ref: 7573-7687

Variable:  SRS023583_Baylor_scaffold_6064 strand: - 46350-46426 alnlen 76 mutations 13 involve-A 13 involve-T 0

ATCATGCAGGCTTCGGTTATGCGAATACGAATAACACCCCCTCGAATACGAATGCGAATGTCAGCTCTCAGCTATG (Template)
ATCGTGCGGGCTTCGGTTATGCGCATACGGATGACGCCCCCTCGCATACGGGTGCGCATGTCGGCTCTCGGCTTTG (Variable)