Template:  SRS023914_Baylor_scaffold_20705 strand: - 5462-5571 ref: 5463-5572
Variable:  SRS023914_Baylor_scaffold_20705 strand: - 32641-32750 alnlen 109 mutations 14 involve-A 13 involve-T 0

5571       CGAGTACAGCGCGACCAACGCGTGGAATTTGAACCTCAACAACGGCAACGCGAACAACAACACTAAGGCAACGAACAAGAACAGAGTTAGGCCAGTTTCAGCACTTTTA (revcomp)
           :::::::::::::::: ::::::::  ::::  ::::::::::::: :::::  :: :: :::::::::::::  :::: ::::::::::::::::::::::: :::::
32750      CGAGTACAGCGCGACCTACGCGTGGCGTTTGCGCCTCAACAACGGCTACGCGGGCAGCAGCACTAAGGCAACGGGCAAGTACAGAGTTAGGCCAGTTTCAGCATTTTTA (revcomp)
Template:  SRS023914_Baylor_scaffold_20705 strand: - 5462-5571 ref: 5463-5572
Variable:  SRS023914_Baylor_scaffold_20705 strand: - 6170-6279 alnlen 109 mutations 15 involve-A 14 involve-T 0

5571       CGAGTACAGCGCGACCAACGCGTGGAATTTGAACCTCAACAACGGCAACGCGAACAACAACACTAAGGCAACGAACAAGAACAGAGTTAGGCCAGTTTCAGCACTTTTA (revcomp)
           ::::: :::::::::: ::::::::  ::::: :::::::: :::: ::::: ::  :: :::::::::::::: ::::  :::::::::::::::::::::: :::::
6279       CGAGTCCAGCGCGACCTACGCGTGGGGTTTGAGCCTCAACATCGGCTACGCGTACGGCAGCACTAAGGCAACGAGCAAGTTCAGAGTTAGGCCAGTTTCAGCATTTTTA (revcomp)