myDGR

myDGR report for SRS024075_LANL_scaffold_16737

Seq: SRS024075_LANL_scaffold_16737 (43273 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 2-16828 bp 2 Locus 2: 31958-42665 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 2-613 bp Feature: CDS Location: 689-880 bp Feature: CDS Location: 877-1257 bp Feature: CDS Location: 1382-1714 bp Feature: CDS Location: 2142-3062 bp Feature: CDS Location: 3055-3444 bp Feature: CDS Location: 3449-3625 bp Feature: CDS Location: 3696-4010 bp Feature: CDS Location: 4007-4696 bp Feature: RT Des: DGR reverse transcriptase Location: 4687-5952 bp Feature: CDS Location: 6084-6251 bp Feature: accessory Des: AVD Location: 6271-6696 bp Feature: target Des: target gene diversified by DGR Location: 6756-8390 bp Feature: CDS Location: 8390-8953 bp Feature: CDS Location: 8946-10004 bp Feature: CDS Location: 9997-10389 bp Feature: CDS Location: 10386-10781 bp Feature: CDS Location: 10771-11739 bp Feature: CDS Location: 11736-12398 bp Feature: CDS Location: 12398-14305 bp Feature: CDS Location: 14538-14969 bp Feature: CDS Location: 14998-15474 bp Feature: CDS Location: 15488-16828 bp Feature: CDS Location: 31958-32293 bp Feature: CDS Location: 32299-34245 bp Feature: CDS Location: 34312-34875 bp Feature: CDS Location: 34880-35413 bp Feature: CDS Location: 35426-36586 bp Feature: CDS Location: 36579-36938 bp Feature: CDS Location: 37093-37374 bp Feature: CDS Location: 37509-37901 bp Feature: CDS Location: 38222-38350 bp Feature: CDS Location: 38666-40246 bp Feature: CDS Location: 40419-41006 bp Feature: CDS Location: 41118-41951 bp Feature: CDS Location: 42071-42271 bp Feature: CDS Location: 42264-42476 bp Feature: target Des: target gene diversified by DGR Location: 42534-43271 bp Sorry, your browser does not support inline SVG.