Template: SRS024075_LANL_scaffold_22810 strand: + 1462-1589 ref: 1462-1589 Variable: SRS024075_LANL_scaffold_22810 strand: + 729-856 alnlen 127 mutations 17 involve-A 17 involve-T 0 1462 ACTGGTCCTCCTCGGAGTTCTACAACAATCCGGCGAACAACGCTCTTTATGTGAATGTGAACAACGGCAACGTGAACAACAACAATAAGAACAACAGAAATAGTTACGTGCGTCCGGTCTTGGCTTT ::::::::::::::::::::: : :: :::::::: : :::::::::::::: ::::: : :::::::::: ::::: ::: :::: :: :::: ::::::::::::::::::::::::::::: 729 ACTGGTCCTCCTCGGAGTTCTGCGACCTTCCGGCGAGCGGCGCTCTTTATGTGAGTGTGAGCGGCGGCAACGTGTACAACTACAGTAAGGACGACAGGAATAGTTACGTGCGTCCGGTCTTGGCTTT