Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS024435_LANL_scaffold_1610 strand: + 1543-1655 ref: 1543-1655

Variable:  SRS024435_LANL_scaffold_1610 strand: + 998-1110 alnlen 112 mutations 23 involve-A 22 involve-T 0

GGTGTCTTGTTCGGCGGTAATGCGAATAACAGCGCGAATGCCGGGCTTTCGTACGCGAATACGAATAACACGGCTACGAATACGAATGCGAATATCGGCTCTCAGCTATACT (Template)
GGTGTCTTGTTCGGCGGTGGTGCGCTTTACGGCGCGTCTGCCGGGCTTTCGTGCGCGTATACGACTTACGCGGCTGCGCTTACGTATGCGGCTATCGGCTCTCGGATTTGCT (Variable)