Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS024435_LANL_scaffold_2449 strand: - 3126-3247 ref: 3127-3248

Variable:  SRS024435_LANL_scaffold_2449 strand: - 3498-3619 alnlen 121 mutations 14 involve-A 14 involve-T 0

GTTTGCGCGTTCAGGCTGCTGGCGGTAACGTGAACAATGGCACGAACGCAGGTGCGTCCAACTCGAATGCGAACAACGCAGCTTCGACTACGAATGCGAACTACTCGTCGCCCCTATACTT (Template)
GTTTGCGCGTTCGGGCTGCTGGCGGTAGCGTGCACAATGGCACGTACGCGGGTGCGTCCAGCTCGCATGCGGGCAACGCGGCTTCGACTACGTATGCGAACTGCTCGTCGCCCCTCTGCTT (Variable)