Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS043001_WUGC_scaffold_43290 strand: - 4477-4593 ref: 4478-4594

Variable:  SRS043001_WUGC_scaffold_43290 strand: - 5091-5207 alnlen 116 mutations 20 involve-A 19 involve-T 1

GTGGTGTCCTGTTCAGCGGTAACGCGAATAACAGTGCGAATGCAGGTCTCGCTTATGCGAATTCGAATAACACCCCCTCGAATACGAATGCGAATATCGGTTCTCACCTATGCTTT (Template)
GTGGTGTCCTGTTCGGCGGGAACGCGTCTGCCGGTGCGAGTGCGGGTCTCGCTTATGCGTATTCGAATTACGCCCCCTCGGGTGCGGATGCGGATGTCGGTTCTCGCCTTTGCTTT (Variable)