Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS043411_WUGC_scaffold_28490 strand: + 1527-1605 ref: 1527-1605

Variable:  SRS043411_WUGC_scaffold_28490 strand: + 1288-1366 alnlen 78 mutations 16 involve-A 15 involve-T 0

GCAGCAGCTTCTATTGGAATCTGAATAATGCTTCTTCTAATCGCAATCGGAATATCAGCAGGCAGTTAGTAAATGCAC (Template)
GCGGCGGCTTCTGTTGGTATCTGGATGATGCTTCTTCTGGTCGCTATCGGAATATCGGCGGGCGGTTGGTGTATGTAC (Variable)