Template: SRS047044_WUGC_scaffold_1816 strand: + 29491-29600 ref: 29491-29600 Variable: SRS047044_WUGC_scaffold_1816 strand: + 28685-28794 alnlen 109 mutations 17 involve-A 17 involve-T 0 29491 ATCAACCGAGAACAGTCCTGCGAACGCGTGGAATCTGAACTTTGGCGACGGCAACCTCAACAACTGGAACAATAAGGTTAAGGATAAGAATCATGTTCGCCCGGTGTCA ::: :::::: ::::::::::::::::::: :::: :::::::: :::: :::: :: ::::: ::::::::::::::::::: :: :::::::::::::::: 28685 ATCTACCGAGTCCAGTCCTGCGAACGCGTGGTTTCTGGGCTTTGGCGTCGGCTGCCTCTACTACTGGGGCAATAAGGTTAAGGATAAGGGTCGTGTTCGCCCGGTGTCA Template: SRS047044_WUGC_scaffold_1816 strand: + 29524-29601 ref: 29491-29600 Variable: SRS047044_WUGC_scaffold_1816 strand: + 28810-28887 alnlen 77 mutations 12 involve-A 12 involve-T 0 29524 TCTGAACTTTGGCGACGGCAACCTCAACAACTGGAACAATAAGGTTAAGGATAAGAATCATGTTCGCCCGGTGTCAG ::::: ::::::::::::: ::::: :: ::::: :: ::::::: :: :::: :::::::::::::::::::: 28810 TCTGAGCTTTGGCGACGGCTACCTCTTCACCTGGACCAGTAAGGTTTTGGGTAAGGGTCATGTTCGCCCGGTGTCAG