Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS048164_WUGC_scaffold_24970 strand: + 25942-26058 ref: 25942-26058

Variable:  SRS048164_WUGC_scaffold_24970 strand: + 25199-25315 alnlen 116 mutations 17 involve-A 17 involve-T 0

GCATCCCGATCCGGGGCGGCAGCTGGAACAACACTTCCAACGCGGGCGTGTTCAAGCTGAACCTGAACAATGCGCGTTCCAACGCCAACGGCAACATTGGGCGGCGTTCCGCTTTT (Template)
GCATCCCGCTCCGGGGCGGCGGCTGGGGCAGCACTTCCGGCGCGGGCGTGTTCAAGCTGGACCTGTTCAATGCGCGTTCCGGCGCCGGCGGCGGCGTTGGGCGGCGTTCCGCTTTT (Variable)