Template: SRS048164_WUGC_scaffold_8644 strand: + 74651-74776 ref: 74651-74776 Variable: SRS048164_WUGC_scaffold_8644 strand: + 73880-74005 alnlen 125 mutations 17 involve-A 14 involve-T 0 74651 GTACTGGAGTAGCAGTGAGAACAGTCAGAACAACAGCTGGAACGTGAACTTTAGTAATGGCAACTTCAACAACAACAACAAGTACAACAGTAACATGGTGAGAGCGGTTGCAGCACTTAACGATA ::::::::::::::::::: :::::::::: ::::::: :::::::::::::: ::::::::::: :::: :: ::::: : ::::::::::::::::::::::::::::: :: : ::: 73880 GTACTGGAGTAGCAGTGAGGGCAGTCAGAACGGCAGCTGGTACGTGAACTTTAGTTATGGCAACTTCGGCAACGGCAGCAAGTGCTACAGTAACATGGTGAGAGCGGTTGCAGCATTTTAGTATA Template: SRS048164_WUGC_scaffold_8644 strand: + 74655-74769 ref: 74651-74776 Variable: SRS048164_WUGC_scaffold_8644 strand: - 21076-21190 alnlen 114 mutations 14 involve-A 13 involve-T 0 (on different strand) 74655 TGGAGTAGCAGTGAGAACAGTCAGAACAACAGCTGGAACGTGAACTTTAGTAATGGCAACTTCAACAACAACAACAAGTACAACAGTAACATGGTGAGAGCGGTTGCAGCACTT ::::::::::::::: :::::::: :: ::::::: ::::: :::::::: :::::::::: :::::: :::::::: ::::::: :::::::::::::::::::::: :: 21190 TGGAGTAGCAGTGAGTACAGTCAGTTCAGCAGCTGGTTCGTGAGCTTTAGTAGTGGCAACTTCTACAACAGCAACAAGTTCAACAGTGGCATGGTGAGAGCGGTTGCAGCATTT (revcomp)