Template:  SRS048164_WUGC_scaffold_8644 strand: + 74651-74776 ref: 74651-74776
Variable:  SRS048164_WUGC_scaffold_8644 strand: + 73880-74005 alnlen 125 mutations 17 involve-A 14 involve-T 0

74651      GTACTGGAGTAGCAGTGAGAACAGTCAGAACAACAGCTGGAACGTGAACTTTAGTAATGGCAACTTCAACAACAACAACAAGTACAACAGTAACATGGTGAGAGCGGTTGCAGCACTTAACGATA 
           :::::::::::::::::::  ::::::::::  ::::::: :::::::::::::: :::::::::::  ::::  :: ::::: : ::::::::::::::::::::::::::::: :: :  :::
73880      GTACTGGAGTAGCAGTGAGGGCAGTCAGAACGGCAGCTGGTACGTGAACTTTAGTTATGGCAACTTCGGCAACGGCAGCAAGTGCTACAGTAACATGGTGAGAGCGGTTGCAGCATTTTAGTATA 
Template:  SRS048164_WUGC_scaffold_8644 strand: + 74655-74769 ref: 74651-74776
Variable:  SRS048164_WUGC_scaffold_8644 strand: - 21076-21190 alnlen 114 mutations 14 involve-A 13 involve-T 0
(on different strand)
74655      TGGAGTAGCAGTGAGAACAGTCAGAACAACAGCTGGAACGTGAACTTTAGTAATGGCAACTTCAACAACAACAACAAGTACAACAGTAACATGGTGAGAGCGGTTGCAGCACTT 
           ::::::::::::::: ::::::::  :: :::::::  ::::: :::::::: :::::::::: :::::: :::::::: :::::::  :::::::::::::::::::::: ::
21190      TGGAGTAGCAGTGAGTACAGTCAGTTCAGCAGCTGGTTCGTGAGCTTTAGTAGTGGCAACTTCTACAACAGCAACAAGTTCAACAGTGGCATGGTGAGAGCGGTTGCAGCATTT (revcomp)