myDGR

myDGR report for SRS050299_LANL_scaffold_14550

Seq: SRS050299_LANL_scaffold_14550 (58852 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 12263-36658 bp 2 Locus 2: 31262-52115 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 12263-12526 bp Feature: CDS Location: 12530-18133 bp Feature: CDS Location: 18135-18644 bp Feature: CDS Location: 18661-19299 bp Feature: CDS Location: 19533-20045 bp Feature: CDS Location: 20047-22884 bp Feature: CDS Location: 22888-24090 bp Feature: CDS Location: 24096-24323 bp Feature: CDS Location: 24313-25335 bp Feature: target Des: target gene diversified by DGR Location: 25357-26676 bp Feature: CDS Location: 26849-27178 bp Feature: RT Des: DGR reverse transcriptase Location: 27189-27869 bp Feature: accessory Des: PAG1 Location: 28031-28618 bp Feature: CDS Location: 28636-29010 bp Feature: CDS Location: 29015-30334 bp Feature: CDS Location: 30364-30849 bp Feature: CDS Location: 30846-31241 bp Feature: CDS Location: 31262-31963 bp Feature: CDS Location: 31963-32526 bp Feature: CDS Location: 32558-32950 bp Feature: CDS Location: 32968-33612 bp Feature: CDS Location: 33701-33994 bp Feature: CDS Location: 33984-34232 bp Feature: CDS Location: 34237-34521 bp Feature: CDS Location: 34518-34730 bp Feature: CDS Location: 34752-35612 bp Feature: CDS Location: 35735-36472 bp Feature: CDS Location: 36473-36658 bp Feature: CDS Location: 31262-31963 bp Feature: CDS Location: 31963-32526 bp Feature: CDS Location: 32558-32950 bp Feature: CDS Location: 32968-33612 bp Feature: CDS Location: 33701-33994 bp Feature: CDS Location: 33984-34232 bp Feature: CDS Location: 34237-34521 bp Feature: CDS Location: 34518-34730 bp Feature: CDS Location: 34752-35612 bp Feature: CDS Location: 35735-36472 bp Feature: CDS Location: 36473-36658 bp Feature: CDS Location: 36805-37650 bp Feature: CDS Location: 37838-38182 bp Feature: CDS Location: 38175-38684 bp Feature: CDS Location: 39085-40347 bp Feature: CDS Location: 40350-40559 bp Feature: CDS Location: 40540-40833 bp Feature: CDS Location: 40821-41360 bp Feature: CDS Location: 41260-41895 bp Feature: target Des: target gene diversified by DGR Location: 41912-42496 bp Feature: CDS Location: 42522-43202 bp Feature: CDS Location: 43527-44072 bp Feature: CDS Location: 44072-44341 bp Feature: CDS Location: 44352-44819 bp Feature: CDS Location: 45431-45637 bp Feature: CDS Location: 45646-46389 bp Feature: CDS Location: 46412-46840 bp Feature: CDS Location: 46855-47154 bp Feature: CDS Location: 47141-47713 bp Feature: CDS Location: 47788-48675 bp Feature: CDS Location: 48672-49646 bp Feature: CDS Location: 49725-50426 bp Feature: CDS Location: 50423-51205 bp Feature: CDS Location: 51487-51738 bp Feature: CDS Location: 51735-51938 bp Feature: CDS Location: 51963-52115 bp Sorry, your browser does not support inline SVG.