Template:  SRS050299_LANL_scaffold_23470 strand: - 80-213 ref: 81-214
Variable:  SRS050299_LANL_scaffold_23470 strand: - 883-1016 alnlen 133 mutations 13 involve-A 12 involve-T 1

213        CACGTCAGGCAACTATTGGTCTGCCTCTGAGGCTTCCGCAGAGTTGGGTTGGAACCAGAATTTCAACAATGGCAACCGCAACAGGAACGCTAAGTCCAATGTGAACAATGTCCGCTGTGTCAGGTGATAAATT (revcomp)
           ::::::::::  ::::::::::::::::::::::::::::::::::::::::  :::: ::::: :::::::: ::::: :::::: ::::::::::::::::  ::::::::::::::::::: ::::: ::
1016       CACGTCAGGCGCCTATTGGTCTGCCTCTGAGGCTTCCGCAGAGTTGGGTTGGGGCCAGTATTTCTACAATGGCCACCGCTACAGGAGCGCTAAGTCCAATGTGGGCAATGTCCGCTGTGTCAGGAGATAAGTT (revcomp)